Cluster: HRGMv2_2685_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2685
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2685_13 | HRGMv2_2685_13_10 | 7887 | 9227 | + | 3.A.1.1.45 |
| TC | HRGMv2_2685_13 | HRGMv2_2685_13_11 | 9329 | 10180 | + | 3.A.1.1.45 |
| TC | HRGMv2_2685_13 | HRGMv2_2685_13_12 | 10180 | 11022 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_2685_13 | HRGMv2_2685_13_13 | 11036 | 12508 | + | GH77 |
Gene ID: HRGMv2_2685_13_10
Type: TC
Location: 7887 - 9227 (+)
Type: TC
Location: 7887 - 9227 (+)
Gene ID: HRGMv2_2685_13_11
Type: TC
Location: 9329 - 10180 (+)
Type: TC
Location: 9329 - 10180 (+)
Gene ID: HRGMv2_2685_13_12
Type: TC
Location: 10180 - 11022 (+)
Type: TC
Location: 10180 - 11022 (+)
Gene ID: HRGMv2_2685_13_13
Type: CAZyme
Location: 11036 - 12508 (+)
Type: CAZyme
Location: 11036 - 12508 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.