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Cluster: HRGMv2_2685_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2685_11 HRGMv2_2685_11_17 14352 15728 - 2.A.66.1.34
TC HRGMv2_2685_11 HRGMv2_2685_11_18 16389 17765 - 1.A.26.1.3
CAZyme HRGMv2_2685_11 HRGMv2_2685_11_19 17977 20997 - GH2
CAZyme HRGMv2_2685_11 HRGMv2_2685_11_20 21094 22782 - GH154
CAZyme HRGMv2_2685_11 HRGMv2_2685_11_21 22782 23942 - GH88
CAZyme HRGMv2_2685_11 HRGMv2_2685_11_22 23948 25744 - GH2
TC HRGMv2_2685_11 HRGMv2_2685_11_23 25815 26675 - 3.A.1.1.11
TC HRGMv2_2685_11 HRGMv2_2685_11_24 26693 27226 - 3.A.1.1.20
Gene ID: HRGMv2_2685_11_17
Type: TC
Location: 14352 - 15728 (-)
Gene ID: HRGMv2_2685_11_18
Type: TC
Location: 16389 - 17765 (-)
Gene ID: HRGMv2_2685_11_19
Type: CAZyme
Location: 17977 - 20997 (-)
Gene ID: HRGMv2_2685_11_20
Type: CAZyme
Location: 21094 - 22782 (-)
Gene ID: HRGMv2_2685_11_21
Type: CAZyme
Location: 22782 - 23942 (-)
Gene ID: HRGMv2_2685_11_22
Type: CAZyme
Location: 23948 - 25744 (-)
Gene ID: HRGMv2_2685_11_23
Type: TC
Location: 25815 - 26675 (-)
Gene ID: HRGMv2_2685_11_24
Type: TC
Location: 26693 - 27226 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Faecalibacterium
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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