Cluster: HRGMv2_2685_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2685
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2685_112 | HRGMv2_2685_112_2 | 917 | 2167 | - | GH3 |
| TC | HRGMv2_2685_112 | HRGMv2_2685_112_3 | 2180 | 2974 | - | 3.A.1.34.1 |
| TC | HRGMv2_2685_112 | HRGMv2_2685_112_4 | 2967 | 3908 | - | 3.A.1.34.1 |
Gene ID: HRGMv2_2685_112_2
Type: CAZyme
Location: 917 - 2167 (-)
Type: CAZyme
Location: 917 - 2167 (-)
Gene ID: HRGMv2_2685_112_3
Type: TC
Location: 2180 - 2974 (-)
Type: TC
Location: 2180 - 2974 (-)
Gene ID: HRGMv2_2685_112_4
Type: TC
Location: 2967 - 3908 (-)
Type: TC
Location: 2967 - 3908 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.