Cluster: HRGMv2_2685_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2685
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2685_102 | HRGMv2_2685_102_5 | 2020 | 2334 | + | 1.E.14.1.17 |
| TC | HRGMv2_2685_102 | HRGMv2_2685_102_6 | 2327 | 3034 | + | 2.A.122.1.6 |
| STP | HRGMv2_2685_102 | HRGMv2_2685_102_7 | 3314 | 3571 | - | HMA |
| TF | HRGMv2_2685_102 | HRGMv2_2685_102_8 | 3693 | 4550 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2685_102 | HRGMv2_2685_102_9 | 4737 | 6998 | + | GT35 |
| TC | HRGMv2_2685_102 | HRGMv2_2685_102_10 | 7153 | 7593 | - | 2.A.64.1.3 |
Gene ID: HRGMv2_2685_102_5
Type: TC
Location: 2020 - 2334 (+)
Type: TC
Location: 2020 - 2334 (+)
Gene ID: HRGMv2_2685_102_6
Type: TC
Location: 2327 - 3034 (+)
Type: TC
Location: 2327 - 3034 (+)
Gene ID: HRGMv2_2685_102_7
Type: STP
Location: 3314 - 3571 (-)
Type: STP
Location: 3314 - 3571 (-)
Gene ID: HRGMv2_2685_102_8
Type: TF
Location: 3693 - 4550 (-)
Type: TF
Location: 3693 - 4550 (-)
Gene ID: HRGMv2_2685_102_9
Type: CAZyme
Location: 4737 - 6998 (+)
Type: CAZyme
Location: 4737 - 6998 (+)
Gene ID: HRGMv2_2685_102_10
Type: TC
Location: 7153 - 7593 (-)
Type: TC
Location: 7153 - 7593 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.