Cluster: HRGMv2_2685_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2685
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2685_82 | HRGMv2_2685_82_4 | 2381 | 3823 | + | 4.A.1.2.7 |
| CAZyme | HRGMv2_2685_82 | HRGMv2_2685_82_5 | 3816 | 4865 | + | GH170 |
| TC | HRGMv2_2685_82 | HRGMv2_2685_82_6 | 4916 | 6292 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_2685_82_4
Type: TC
Location: 2381 - 3823 (+)
Type: TC
Location: 2381 - 3823 (+)
Gene ID: HRGMv2_2685_82_5
Type: CAZyme
Location: 3816 - 4865 (+)
Type: CAZyme
Location: 3816 - 4865 (+)
Gene ID: HRGMv2_2685_82_6
Type: TC
Location: 4916 - 6292 (-)
Type: TC
Location: 4916 - 6292 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.