Cluster: HRGMv2_2685_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2685
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2685_77 | HRGMv2_2685_77_1 | 3 | 1229 | - | GH2 |
| TF | HRGMv2_2685_77 | HRGMv2_2685_77_2 | 1363 | 2574 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2685_77 | HRGMv2_2685_77_3 | 2725 | 4125 | - | 2.A.2.3.1 |
Gene ID: HRGMv2_2685_77_1
Type: CAZyme
Location: 3 - 1229 (-)
Type: CAZyme
Location: 3 - 1229 (-)
Gene ID: HRGMv2_2685_77_2
Type: TF
Location: 1363 - 2574 (-)
Type: TF
Location: 1363 - 2574 (-)
Gene ID: HRGMv2_2685_77_3
Type: TC
Location: 2725 - 4125 (-)
Type: TC
Location: 2725 - 4125 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.