Cluster: HRGMv2_2685_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2685
- CGC Family ID: CGCFAM_10148
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2685_48 | HRGMv2_2685_48_3 | 1515 | 2933 | + | GT5 |
| sulfatase | HRGMv2_2685_48 | HRGMv2_2685_48_4 | 3478 | 4551 | + | S1_4 |
| pfam | HRGMv2_2685_48 | HRGMv2_2685_48_5 | 4992 | 6017 | + | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd |
| TC | HRGMv2_2685_48 | HRGMv2_2685_48_6 | 6524 | 8866 | + | 9.A.8.1.6 |
Gene ID: HRGMv2_2685_48_3
Type: CAZyme
Location: 1515 - 2933 (+)
Type: CAZyme
Location: 1515 - 2933 (+)
Gene ID: HRGMv2_2685_48_4
Type: sulfatase
Location: 3478 - 4551 (+)
Type: sulfatase
Location: 3478 - 4551 (+)
Gene ID: HRGMv2_2685_48_5
Type: pfam
Location: 4992 - 6017 (+)
Type: pfam
Location: 4992 - 6017 (+)
Gene ID: HRGMv2_2685_48_6
Type: TC
Location: 6524 - 8866 (+)
Type: TC
Location: 6524 - 8866 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.