Cluster: HRGMv2_2685_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2685
- CGC Family ID: CGCFAM_03430
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2685_43 | HRGMv2_2685_43_4 | 3187 | 3969 | + | 2.A.5.5.2 |
| TF | HRGMv2_2685_43 | HRGMv2_2685_43_5 | 4180 | 5997 | - | HTH_8 |
| pfam | HRGMv2_2685_43 | HRGMv2_2685_43_6 | 6214 | 7455 | + | SBD_N | NBD_C |
| CAZyme | HRGMv2_2685_43 | HRGMv2_2685_43_7 | 7520 | 8680 | + | GH33 |
Gene ID: HRGMv2_2685_43_4
Type: TC
Location: 3187 - 3969 (+)
Type: TC
Location: 3187 - 3969 (+)
Gene ID: HRGMv2_2685_43_5
Type: TF
Location: 4180 - 5997 (-)
Type: TF
Location: 4180 - 5997 (-)
Gene ID: HRGMv2_2685_43_6
Type: pfam
Location: 6214 - 7455 (+)
Type: pfam
Location: 6214 - 7455 (+)
Gene ID: HRGMv2_2685_43_7
Type: CAZyme
Location: 7520 - 8680 (+)
Type: CAZyme
Location: 7520 - 8680 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.