Cluster: HRGMv2_2685_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2685
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2685_29 | HRGMv2_2685_29_14 | 13114 | 13905 | + | 3.A.1.103.6 |
| TC | HRGMv2_2685_29 | HRGMv2_2685_29_15 | 13918 | 14661 | + | 3.A.1.103.1 |
| CAZyme | HRGMv2_2685_29 | HRGMv2_2685_29_16 | 14663 | 16540 | + | GT2 | GT2 |
Gene ID: HRGMv2_2685_29_14
Type: TC
Location: 13114 - 13905 (+)
Type: TC
Location: 13114 - 13905 (+)
Gene ID: HRGMv2_2685_29_15
Type: TC
Location: 13918 - 14661 (+)
Type: TC
Location: 13918 - 14661 (+)
Gene ID: HRGMv2_2685_29_16
Type: CAZyme
Location: 14663 - 16540 (+)
Type: CAZyme
Location: 14663 - 16540 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.