Cluster: HRGMv2_2684_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2684
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2684_9 | HRGMv2_2684_9_26 | 28867 | 30207 | + | 3.A.1.1.45 |
| TC | HRGMv2_2684_9 | HRGMv2_2684_9_27 | 30310 | 31161 | + | 3.A.1.1.45 |
| TC | HRGMv2_2684_9 | HRGMv2_2684_9_28 | 31161 | 32003 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_2684_9 | HRGMv2_2684_9_29 | 32017 | 33489 | + | GH77 |
Gene ID: HRGMv2_2684_9_26
Type: TC
Location: 28867 - 30207 (+)
Type: TC
Location: 28867 - 30207 (+)
Gene ID: HRGMv2_2684_9_27
Type: TC
Location: 30310 - 31161 (+)
Type: TC
Location: 30310 - 31161 (+)
Gene ID: HRGMv2_2684_9_28
Type: TC
Location: 31161 - 32003 (+)
Type: TC
Location: 31161 - 32003 (+)
Gene ID: HRGMv2_2684_9_29
Type: CAZyme
Location: 32017 - 33489 (+)
Type: CAZyme
Location: 32017 - 33489 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.