Cluster: HRGMv2_2684_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2684
- CGC Family ID: CGCFAM_00131
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2684_8 | HRGMv2_2684_8_57 | 64949 | 66535 | + | 4.A.1.1.8 |
| CAZyme | HRGMv2_2684_8 | HRGMv2_2684_8_58 | 66591 | 67919 | + | GH4 |
| pfam | HRGMv2_2684_8 | HRGMv2_2684_8_59 | 68555 | 69382 | - | SpoU_methylase |
| TC | HRGMv2_2684_8 | HRGMv2_2684_8_60 | 69505 | 72702 | - | 3.A.1.122.14 |
Gene ID: HRGMv2_2684_8_57
Type: TC
Location: 64949 - 66535 (+)
Type: TC
Location: 64949 - 66535 (+)
Gene ID: HRGMv2_2684_8_58
Type: CAZyme
Location: 66591 - 67919 (+)
Type: CAZyme
Location: 66591 - 67919 (+)
Gene ID: HRGMv2_2684_8_59
Type: pfam
Location: 68555 - 69382 (-)
Type: pfam
Location: 68555 - 69382 (-)
Gene ID: HRGMv2_2684_8_60
Type: TC
Location: 69505 - 72702 (-)
Type: TC
Location: 69505 - 72702 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.