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Cluster: HRGMv2_2684_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2684_7 HRGMv2_2684_7_19 18028 20604 - GT51
NULL(UNKNOWN) HRGMv2_2684_7 HRGMv2_2684_7_20 20844 21218 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2684_7 HRGMv2_2684_7_21 21449 23227 - 2.A.58.2.2
NULL(UNKNOWN) HRGMv2_2684_7 HRGMv2_2684_7_22 23492 23608 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_2684_7 HRGMv2_2684_7_23 23991 24503 - C60.UPA
TC HRGMv2_2684_7 HRGMv2_2684_7_24 24713 25711 - 2.A.58.2.2
TF HRGMv2_2684_7 HRGMv2_2684_7_25 25915 26424 + MarR
TC HRGMv2_2684_7 HRGMv2_2684_7_26 26408 28705 + 3.A.1.135.6
TC HRGMv2_2684_7 HRGMv2_2684_7_27 28707 30518 + 3.A.1.135.6
Gene ID: HRGMv2_2684_7_19
Type: CAZyme
Location: 18028 - 20604 (-)
Gene ID: HRGMv2_2684_7_20
Type:
Location: 20844 - 21218 (+)
Gene ID: HRGMv2_2684_7_21
Type: TC
Location: 21449 - 23227 (-)
Gene ID: HRGMv2_2684_7_22
Type:
Location: 23492 - 23608 (-)
Gene ID: HRGMv2_2684_7_23
Type: peptidase
Location: 23991 - 24503 (-)
Gene ID: HRGMv2_2684_7_24
Type: TC
Location: 24713 - 25711 (-)
Gene ID: HRGMv2_2684_7_25
Type: TF
Location: 25915 - 26424 (+)
Gene ID: HRGMv2_2684_7_26
Type: TC
Location: 26408 - 28705 (+)
Gene ID: HRGMv2_2684_7_27
Type: TC
Location: 28707 - 30518 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Faecalibacterium
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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