Cluster: HRGMv2_2684_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2684
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2684_3 | HRGMv2_2684_3_62 | 69150 | 69860 | - | 9.B.34.1.2 |
| CAZyme | HRGMv2_2684_3 | HRGMv2_2684_3_63 | 70621 | 71469 | + | CE4 |
| TF | HRGMv2_2684_3 | HRGMv2_2684_3_64 | 71476 | 72321 | - | MerR |
| peptidase | HRGMv2_2684_3 | HRGMv2_2684_3_65 | 72457 | 73860 | - | M18.UPW |
| CAZyme | HRGMv2_2684_3 | HRGMv2_2684_3_66 | 73885 | 74550 | - | GH23 |
Gene ID: HRGMv2_2684_3_62
Type: TC
Location: 69150 - 69860 (-)
Type: TC
Location: 69150 - 69860 (-)
Gene ID: HRGMv2_2684_3_63
Type: CAZyme
Location: 70621 - 71469 (+)
Type: CAZyme
Location: 70621 - 71469 (+)
Gene ID: HRGMv2_2684_3_64
Type: TF
Location: 71476 - 72321 (-)
Type: TF
Location: 71476 - 72321 (-)
Gene ID: HRGMv2_2684_3_65
Type: peptidase
Location: 72457 - 73860 (-)
Type: peptidase
Location: 72457 - 73860 (-)
Gene ID: HRGMv2_2684_3_66
Type: CAZyme
Location: 73885 - 74550 (-)
Type: CAZyme
Location: 73885 - 74550 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.