Cluster: HRGMv2_2684_CGC27
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2684
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2684_86 | HRGMv2_2684_86_1 | 2 | 889 | - | 3.A.2.1.5 |
| pfam | HRGMv2_2684_86 | HRGMv2_2684_86_2 | 1235 | 1774 | - | OSCP |
| pfam | HRGMv2_2684_86 | HRGMv2_2684_86_3 | 1771 | 2277 | - | ATP-synt_B |
| TC | HRGMv2_2684_86 | HRGMv2_2684_86_4 | 2315 | 2596 | - | 3.A.2.1.2 |
| TC | HRGMv2_2684_86 | HRGMv2_2684_86_5 | 2648 | 3391 | - | 3.A.2.1.5 |
| pfam | HRGMv2_2684_86 | HRGMv2_2684_86_6 | 3392 | 3895 | - | ATP-synt_I |
| pfam | HRGMv2_2684_86 | HRGMv2_2684_86_7 | 3911 | 4171 | - | ATPase_gene1 |
| CAZyme | HRGMv2_2684_86 | HRGMv2_2684_86_8 | 4516 | 5520 | - | GT5 |
Gene ID: HRGMv2_2684_86_1
Type: TC
Location: 2 - 889 (-)
Type: TC
Location: 2 - 889 (-)
Gene ID: HRGMv2_2684_86_2
Type: pfam
Location: 1235 - 1774 (-)
Type: pfam
Location: 1235 - 1774 (-)
Gene ID: HRGMv2_2684_86_3
Type: pfam
Location: 1771 - 2277 (-)
Type: pfam
Location: 1771 - 2277 (-)
Gene ID: HRGMv2_2684_86_4
Type: TC
Location: 2315 - 2596 (-)
Type: TC
Location: 2315 - 2596 (-)
Gene ID: HRGMv2_2684_86_5
Type: TC
Location: 2648 - 3391 (-)
Type: TC
Location: 2648 - 3391 (-)
Gene ID: HRGMv2_2684_86_6
Type: pfam
Location: 3392 - 3895 (-)
Type: pfam
Location: 3392 - 3895 (-)
Gene ID: HRGMv2_2684_86_7
Type: pfam
Location: 3911 - 4171 (-)
Type: pfam
Location: 3911 - 4171 (-)
Gene ID: HRGMv2_2684_86_8
Type: CAZyme
Location: 4516 - 5520 (-)
Type: CAZyme
Location: 4516 - 5520 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.