Cluster: HRGMv2_2684_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2684
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2684_67 | HRGMv2_2684_67_3 | 1216 | 2682 | + | 4.A.1.1.7 |
| CAZyme | HRGMv2_2684_67 | HRGMv2_2684_67_4 | 3183 | 4310 | + | CE9 |
| TC | HRGMv2_2684_67 | HRGMv2_2684_67_5 | 4440 | 4952 | - | 4.A.1.1.13 |
| CAZyme | HRGMv2_2684_67 | HRGMv2_2684_67_6 | 5125 | 7287 | - | GH112 |
Gene ID: HRGMv2_2684_67_3
Type: TC
Location: 1216 - 2682 (+)
Type: TC
Location: 1216 - 2682 (+)
Gene ID: HRGMv2_2684_67_4
Type: CAZyme
Location: 3183 - 4310 (+)
Type: CAZyme
Location: 3183 - 4310 (+)
Gene ID: HRGMv2_2684_67_5
Type: TC
Location: 4440 - 4952 (-)
Type: TC
Location: 4440 - 4952 (-)
Gene ID: HRGMv2_2684_67_6
Type: CAZyme
Location: 5125 - 7287 (-)
Type: CAZyme
Location: 5125 - 7287 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.