Cluster: HRGMv2_2684_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2684
- CGC Family ID: CGCFAM_00688
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2684_60 | HRGMv2_2684_60_3 | 3060 | 4082 | - | GT2 |
| pfam | HRGMv2_2684_60 | HRGMv2_2684_60_4 | 4180 | 4830 | - | Hydrolase | HAD | HAD_2 |
| pfam | HRGMv2_2684_60 | HRGMv2_2684_60_5 | 5108 | 6289 | + | Patatin |
| TC | HRGMv2_2684_60 | HRGMv2_2684_60_6 | 6276 | 7907 | + | 8.A.7.1.5 |
Gene ID: HRGMv2_2684_60_3
Type: CAZyme
Location: 3060 - 4082 (-)
Type: CAZyme
Location: 3060 - 4082 (-)
Gene ID: HRGMv2_2684_60_4
Type: pfam
Location: 4180 - 4830 (-)
Type: pfam
Location: 4180 - 4830 (-)
Gene ID: HRGMv2_2684_60_5
Type: pfam
Location: 5108 - 6289 (+)
Type: pfam
Location: 5108 - 6289 (+)
Gene ID: HRGMv2_2684_60_6
Type: TC
Location: 6276 - 7907 (+)
Type: TC
Location: 6276 - 7907 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.