Cluster: HRGMv2_2684_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2684
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2684_54 | HRGMv2_2684_54_4 | 3162 | 4448 | - | 2.A.37.3.3 |
| CAZyme | HRGMv2_2684_54 | HRGMv2_2684_54_5 | 4921 | 5949 | - | GT2 |
| TC | HRGMv2_2684_54 | HRGMv2_2684_54_6 | 6200 | 7777 | + | 2.A.16.2.2 |
Gene ID: HRGMv2_2684_54_4
Type: TC
Location: 3162 - 4448 (-)
Type: TC
Location: 3162 - 4448 (-)
Gene ID: HRGMv2_2684_54_5
Type: CAZyme
Location: 4921 - 5949 (-)
Type: CAZyme
Location: 4921 - 5949 (-)
Gene ID: HRGMv2_2684_54_6
Type: TC
Location: 6200 - 7777 (+)
Type: TC
Location: 6200 - 7777 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.