Cluster: HRGMv2_2684_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2684
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2684_41 | HRGMv2_2684_41_5 | 4280 | 5281 | - | GT2 |
| TF | HRGMv2_2684_41 | HRGMv2_2684_41_6 | 5504 | 5881 | + | GntR |
| TC | HRGMv2_2684_41 | HRGMv2_2684_41_7 | 5874 | 6572 | + | 3.A.1.132.6 |
Gene ID: HRGMv2_2684_41_5
Type: CAZyme
Location: 4280 - 5281 (-)
Type: CAZyme
Location: 4280 - 5281 (-)
Gene ID: HRGMv2_2684_41_6
Type: TF
Location: 5504 - 5881 (+)
Type: TF
Location: 5504 - 5881 (+)
Gene ID: HRGMv2_2684_41_7
Type: TC
Location: 5874 - 6572 (+)
Type: TC
Location: 5874 - 6572 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.