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Cluster: HRGMv2_2684_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2684_17 HRGMv2_2684_17_6 4592 6997 + GT35
CAZyme HRGMv2_2684_17 HRGMv2_2684_17_7 7072 8928 + GH13_39
pfam HRGMv2_2684_17 HRGMv2_2684_17_8 9100 9561 + NfeD
TC HRGMv2_2684_17 HRGMv2_2684_17_9 9577 10479 + 8.A.21.2.2
NULL(UNKNOWN) HRGMv2_2684_17 HRGMv2_2684_17_10 10580 10978 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2684_17 HRGMv2_2684_17_11 11180 12466 - Orn_DAP_Arg_deC | Orn_Arg_deC_N
TC HRGMv2_2684_17 HRGMv2_2684_17_12 12551 14449 - 9.B.18.2.1
pfam HRGMv2_2684_17 HRGMv2_2684_17_13 14600 16165 - Polysacc_synt
TC HRGMv2_2684_17 HRGMv2_2684_17_14 16375 17208 + 3.A.1.132.3
Gene ID: HRGMv2_2684_17_6
Type: CAZyme
Location: 4592 - 6997 (+)
Gene ID: HRGMv2_2684_17_7
Type: CAZyme
Location: 7072 - 8928 (+)
Gene ID: HRGMv2_2684_17_8
Type: pfam
Location: 9100 - 9561 (+)
Gene ID: HRGMv2_2684_17_9
Type: TC
Location: 9577 - 10479 (+)
Gene ID: HRGMv2_2684_17_10
Type:
Location: 10580 - 10978 (-)
Gene ID: HRGMv2_2684_17_11
Type: pfam
Location: 11180 - 12466 (-)
Gene ID: HRGMv2_2684_17_12
Type: TC
Location: 12551 - 14449 (-)
Gene ID: HRGMv2_2684_17_13
Type: pfam
Location: 14600 - 16165 (-)
Gene ID: HRGMv2_2684_17_14
Type: TC
Location: 16375 - 17208 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Faecalibacterium
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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