Cluster: HRGMv2_2684_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2684
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2684_14 | HRGMv2_2684_14_11 | 8442 | 9908 | - | 4.C.1.1.4 |
| TC | HRGMv2_2684_14 | HRGMv2_2684_14_12 | 9948 | 11420 | - | 4.C.1.1.4 |
| pfam | HRGMv2_2684_14 | HRGMv2_2684_14_13 | 11794 | 12909 | + | Acyl_transf_3 |
| NULL(UNKNOWN) | HRGMv2_2684_14 | HRGMv2_2684_14_14 | 12976 | 13770 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2684_14 | HRGMv2_2684_14_15 | 13806 | 15410 | + | GT4 |
Gene ID: HRGMv2_2684_14_11
Type: TC
Location: 8442 - 9908 (-)
Type: TC
Location: 8442 - 9908 (-)
Gene ID: HRGMv2_2684_14_12
Type: TC
Location: 9948 - 11420 (-)
Type: TC
Location: 9948 - 11420 (-)
Gene ID: HRGMv2_2684_14_13
Type: pfam
Location: 11794 - 12909 (+)
Type: pfam
Location: 11794 - 12909 (+)
Gene ID: HRGMv2_2684_14_14
Type:
Location: 12976 - 13770 (+)
Type:
Location: 12976 - 13770 (+)
Gene ID: HRGMv2_2684_14_15
Type: CAZyme
Location: 13806 - 15410 (+)
Type: CAZyme
Location: 13806 - 15410 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.