Cluster: HRGMv2_2684_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2684
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2684_1 | HRGMv2_2684_1_11 | 12838 | 14607 | - | GH2 |
| TC | HRGMv2_2684_1 | HRGMv2_2684_1_12 | 14735 | 16654 | - | 3.A.1.135.5 |
| TC | HRGMv2_2684_1 | HRGMv2_2684_1_13 | 16654 | 18405 | - | 3.A.1.135.5 |
| TF | HRGMv2_2684_1 | HRGMv2_2684_1_14 | 18546 | 19028 | - | MarR |
| sulfatase | HRGMv2_2684_1 | HRGMv2_2684_1_15 | 19179 | 20150 | - | S1_15 |
| CAZyme | HRGMv2_2684_1 | HRGMv2_2684_1_16 | 20231 | 21670 | - | GH1 |
Gene ID: HRGMv2_2684_1_11
Type: CAZyme
Location: 12838 - 14607 (-)
Type: CAZyme
Location: 12838 - 14607 (-)
Gene ID: HRGMv2_2684_1_12
Type: TC
Location: 14735 - 16654 (-)
Type: TC
Location: 14735 - 16654 (-)
Gene ID: HRGMv2_2684_1_13
Type: TC
Location: 16654 - 18405 (-)
Type: TC
Location: 16654 - 18405 (-)
Gene ID: HRGMv2_2684_1_14
Type: TF
Location: 18546 - 19028 (-)
Type: TF
Location: 18546 - 19028 (-)
Gene ID: HRGMv2_2684_1_15
Type: sulfatase
Location: 19179 - 20150 (-)
Type: sulfatase
Location: 19179 - 20150 (-)
Gene ID: HRGMv2_2684_1_16
Type: CAZyme
Location: 20231 - 21670 (-)
Type: CAZyme
Location: 20231 - 21670 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.