dbCAN Logo

Cluster: HRGMv2_2673_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2673_6 HRGMv2_2673_6_64 69677 70792 - GT4
pfam HRGMv2_2673_6 HRGMv2_2673_6_65 70801 71721 - 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2
pfam HRGMv2_2673_6 HRGMv2_2673_6_66 71761 72594 - HpcH_HpaI
TC HRGMv2_2673_6 HRGMv2_2673_6_67 72594 73244 - 9.B.18.1.3
pfam HRGMv2_2673_6 HRGMv2_2673_6_68 73403 74800 - tRNA-synt_1 | tRNA-synt_1e | DALR_2 | tRNA-synt_1g | tRNA-synt_1g | CysS_C
pfam HRGMv2_2673_6 HRGMv2_2673_6_69 74787 75467 - Hexapep | SATase_N
TC HRGMv2_2673_6 HRGMv2_2673_6_70 75759 76361 - 4.F.1.1.7
Gene ID: HRGMv2_2673_6_64
Type: CAZyme
Location: 69677 - 70792 (-)
Gene ID: HRGMv2_2673_6_65
Type: pfam
Location: 70801 - 71721 (-)
Gene ID: HRGMv2_2673_6_66
Type: pfam
Location: 71761 - 72594 (-)
Gene ID: HRGMv2_2673_6_67
Type: TC
Location: 72594 - 73244 (-)
Gene ID: HRGMv2_2673_6_68
Type: pfam
Location: 73403 - 74800 (-)
Gene ID: HRGMv2_2673_6_69
Type: pfam
Location: 74787 - 75467 (-)
Gene ID: HRGMv2_2673_6_70
Type: TC
Location: 75759 - 76361 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2673_6_68 vegan > omnivore 1.05425 0.03558
HRGMv2_2673_6_68 vegetarian > omnivore 1.66171 0.03761

🧭 Explore Read Mapping of CGC

← Back to Cluster List