Cluster: HRGMv2_2667_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2667
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2667_22 | HRGMv2_2667_22_7 | 6324 | 8204 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_2667_22 | HRGMv2_2667_22_8 | 8216 | 9424 | + | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2667_22 | HRGMv2_2667_22_9 | 9427 | 10551 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2667_22 | HRGMv2_2667_22_10 | 10565 | 11989 | + | GT5 |
| TC | HRGMv2_2667_22 | HRGMv2_2667_22_11 | 12051 | 12986 | - | 1.A.35.1.2 |
Gene ID: HRGMv2_2667_22_7
Type: CAZyme
Location: 6324 - 8204 (+)
Type: CAZyme
Location: 6324 - 8204 (+)
Gene ID: HRGMv2_2667_22_8
Type: pfam
Location: 8216 - 9424 (+)
Type: pfam
Location: 8216 - 9424 (+)
Gene ID: HRGMv2_2667_22_9
Type: pfam
Location: 9427 - 10551 (+)
Type: pfam
Location: 9427 - 10551 (+)
Gene ID: HRGMv2_2667_22_10
Type: CAZyme
Location: 10565 - 11989 (+)
Type: CAZyme
Location: 10565 - 11989 (+)
Gene ID: HRGMv2_2667_22_11
Type: TC
Location: 12051 - 12986 (-)
Type: TC
Location: 12051 - 12986 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-217
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.