Cluster: HRGMv2_2667_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2667
- CGC Family ID: CGCFAM_03338
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2667_20 | HRGMv2_2667_20_1 | 2 | 1216 | + | 2.A.2.3.1 |
| pfam | HRGMv2_2667_20 | HRGMv2_2667_20_2 | 1297 | 2085 | - | LCM |
| CAZyme | HRGMv2_2667_20 | HRGMv2_2667_20_3 | 2466 | 3830 | + | GH4 |
| CAZyme | HRGMv2_2667_20 | HRGMv2_2667_20_4 | 3907 | 5997 | - | GH36 |
| peptidase | HRGMv2_2667_20 | HRGMv2_2667_20_5 | 6336 | 7295 | + | S09.UPW |
| TC | HRGMv2_2667_20 | HRGMv2_2667_20_6 | 7360 | 8811 | + | 2.A.2.3.2 |
Gene ID: HRGMv2_2667_20_1
Type: TC
Location: 2 - 1216 (+)
Type: TC
Location: 2 - 1216 (+)
Gene ID: HRGMv2_2667_20_2
Type: pfam
Location: 1297 - 2085 (-)
Type: pfam
Location: 1297 - 2085 (-)
Gene ID: HRGMv2_2667_20_3
Type: CAZyme
Location: 2466 - 3830 (+)
Type: CAZyme
Location: 2466 - 3830 (+)
Gene ID: HRGMv2_2667_20_4
Type: CAZyme
Location: 3907 - 5997 (-)
Type: CAZyme
Location: 3907 - 5997 (-)
Gene ID: HRGMv2_2667_20_5
Type: peptidase
Location: 6336 - 7295 (+)
Type: peptidase
Location: 6336 - 7295 (+)
Gene ID: HRGMv2_2667_20_6
Type: TC
Location: 7360 - 8811 (+)
Type: TC
Location: 7360 - 8811 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-217
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.