Cluster: HRGMv2_2667_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2667
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2667_240 | HRGMv2_2667_240_1 | 3 | 341 | - | 3.A.1.122.14 |
| TC | HRGMv2_2667_240 | HRGMv2_2667_240_2 | 434 | 904 | + | 9.A.11.1.1 |
| TC | HRGMv2_2667_240 | HRGMv2_2667_240_3 | 914 | 1270 | + | 9.A.11.1.1 |
| pfam | HRGMv2_2667_240 | HRGMv2_2667_240_4 | 1407 | 1736 | + | SCP2 |
| CAZyme | HRGMv2_2667_240 | HRGMv2_2667_240_5 | 1974 | 2516 | + | GH3 |
Gene ID: HRGMv2_2667_240_1
Type: TC
Location: 3 - 341 (-)
Type: TC
Location: 3 - 341 (-)
Gene ID: HRGMv2_2667_240_2
Type: TC
Location: 434 - 904 (+)
Type: TC
Location: 434 - 904 (+)
Gene ID: HRGMv2_2667_240_3
Type: TC
Location: 914 - 1270 (+)
Type: TC
Location: 914 - 1270 (+)
Gene ID: HRGMv2_2667_240_4
Type: pfam
Location: 1407 - 1736 (+)
Type: pfam
Location: 1407 - 1736 (+)
Gene ID: HRGMv2_2667_240_5
Type: CAZyme
Location: 1974 - 2516 (+)
Type: CAZyme
Location: 1974 - 2516 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-217
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2667_240_5 | vegan > vegetarian | 3.79175 | 0.03475 |