Cluster: HRGMv2_2666_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2666
- CGC Family ID: CGCFAM_03338
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2666_2 | HRGMv2_2666_2_89 | 103891 | 105255 | + | GH4 |
| TF | HRGMv2_2666_2 | HRGMv2_2666_2_90 | 105379 | 106617 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2666_2 | HRGMv2_2666_2_91 | 106653 | 108743 | - | GH36 |
| peptidase | HRGMv2_2666_2 | HRGMv2_2666_2_92 | 109062 | 110021 | + | S09.UNC |
| TC | HRGMv2_2666_2 | HRGMv2_2666_2_93 | 110086 | 111537 | + | 2.A.2.3.2 |
Gene ID: HRGMv2_2666_2_89
Type: CAZyme
Location: 103891 - 105255 (+)
Type: CAZyme
Location: 103891 - 105255 (+)
Gene ID: HRGMv2_2666_2_90
Type: TF
Location: 105379 - 106617 (+)
Type: TF
Location: 105379 - 106617 (+)
Gene ID: HRGMv2_2666_2_91
Type: CAZyme
Location: 106653 - 108743 (-)
Type: CAZyme
Location: 106653 - 108743 (-)
Gene ID: HRGMv2_2666_2_92
Type: peptidase
Location: 109062 - 110021 (+)
Type: peptidase
Location: 109062 - 110021 (+)
Gene ID: HRGMv2_2666_2_93
Type: TC
Location: 110086 - 111537 (+)
Type: TC
Location: 110086 - 111537 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-217
Species
CAG-217 sp000436335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2666_2_93 | vegan > vegetarian | 17.79028 | 0.04863 |