Cluster: HRGMv2_2666_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2666
- CGC Family ID: CGCFAM_01328
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2666_56 | HRGMv2_2666_56_1 | 1 | 1035 | - | GH3 |
| pfam | HRGMv2_2666_56 | HRGMv2_2666_56_2 | 1269 | 1598 | - | SCP2 |
| pfam | HRGMv2_2666_56 | HRGMv2_2666_56_3 | 1735 | 2088 | - | SpoVAC_SpoVAEB |
| TC | HRGMv2_2666_56 | HRGMv2_2666_56_4 | 2100 | 2543 | - | 9.A.11.1.1 |
| TC | HRGMv2_2666_56 | HRGMv2_2666_56_5 | 2663 | 3409 | + | 3.A.1.122.14 |
Gene ID: HRGMv2_2666_56_1
Type: CAZyme
Location: 1 - 1035 (-)
Type: CAZyme
Location: 1 - 1035 (-)
Gene ID: HRGMv2_2666_56_2
Type: pfam
Location: 1269 - 1598 (-)
Type: pfam
Location: 1269 - 1598 (-)
Gene ID: HRGMv2_2666_56_3
Type: pfam
Location: 1735 - 2088 (-)
Type: pfam
Location: 1735 - 2088 (-)
Gene ID: HRGMv2_2666_56_4
Type: TC
Location: 2100 - 2543 (-)
Type: TC
Location: 2100 - 2543 (-)
Gene ID: HRGMv2_2666_56_5
Type: TC
Location: 2663 - 3409 (+)
Type: TC
Location: 2663 - 3409 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-217
Species
CAG-217 sp000436335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2666_56_1 | vegan > vegetarian | 2.80726 | 0.04863 |
| HRGMv2_2666_56_2 | vegan > vegetarian | 18.06324 | 0.04863 |
| HRGMv2_2666_56_3 | vegan > vegetarian | 17.93522 | 0.04863 |