Cluster: HRGMv2_2666_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2666
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2666_55 | HRGMv2_2666_55_2 | 1677 | 3203 | + | 2.A.21.2.4 |
| STP | HRGMv2_2666_55 | HRGMv2_2666_55_3 | 3200 | 3694 | + | HD |
| TC | HRGMv2_2666_55 | HRGMv2_2666_55_4 | 3753 | 4313 | - | 3.A.1.25.3 |
| CAZyme | HRGMv2_2666_55 | HRGMv2_2666_55_5 | 4562 | 5278 | + | GH43_32 |
Gene ID: HRGMv2_2666_55_2
Type: TC
Location: 1677 - 3203 (+)
Type: TC
Location: 1677 - 3203 (+)
Gene ID: HRGMv2_2666_55_3
Type: STP
Location: 3200 - 3694 (+)
Type: STP
Location: 3200 - 3694 (+)
Gene ID: HRGMv2_2666_55_4
Type: TC
Location: 3753 - 4313 (-)
Type: TC
Location: 3753 - 4313 (-)
Gene ID: HRGMv2_2666_55_5
Type: CAZyme
Location: 4562 - 5278 (+)
Type: CAZyme
Location: 4562 - 5278 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-217
Species
CAG-217 sp000436335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2666_55_3 | vegan > vegetarian | 17.96748 | 0.04863 |
| HRGMv2_2666_55_4 | vegan > vegetarian | 17.93095 | 0.04863 |
| HRGMv2_2666_55_5 | vegan > vegetarian | 17.34189 | 0.04863 |