Cluster: HRGMv2_2666_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2666
- CGC Family ID: CGCFAM_05156
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2666_39 | HRGMv2_2666_39_2 | 2068 | 3747 | - | GH36 |
| CAZyme | HRGMv2_2666_39 | HRGMv2_2666_39_3 | 3747 | 6833 | - | GH2 |
| TF | HRGMv2_2666_39 | HRGMv2_2666_39_4 | 7086 | 7823 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2666_39 | HRGMv2_2666_39_5 | 7938 | 10310 | + | GH3 |
| TC | HRGMv2_2666_39 | HRGMv2_2666_39_6 | 10421 | 11818 | + | 2.A.66.1.33 |
Gene ID: HRGMv2_2666_39_2
Type: CAZyme
Location: 2068 - 3747 (-)
Type: CAZyme
Location: 2068 - 3747 (-)
Gene ID: HRGMv2_2666_39_3
Type: CAZyme
Location: 3747 - 6833 (-)
Type: CAZyme
Location: 3747 - 6833 (-)
Gene ID: HRGMv2_2666_39_4
Type: TF
Location: 7086 - 7823 (-)
Type: TF
Location: 7086 - 7823 (-)
Gene ID: HRGMv2_2666_39_5
Type: CAZyme
Location: 7938 - 10310 (+)
Type: CAZyme
Location: 7938 - 10310 (+)
Gene ID: HRGMv2_2666_39_6
Type: TC
Location: 10421 - 11818 (+)
Type: TC
Location: 10421 - 11818 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-217
Species
CAG-217 sp000436335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2666_39_2 | vegan > vegetarian | 17.63780 | 0.04863 |