Cluster: HRGMv2_2666_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2666
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2666_1 | HRGMv2_2666_1_90 | 111803 | 113710 | + | GH127 |
| STP | HRGMv2_2666_1 | HRGMv2_2666_1_91 | 113771 | 115660 | - | HATPase_c |
| pfam | HRGMv2_2666_1 | HRGMv2_2666_1_92 | 115831 | 117300 | - | Fucose_iso_C |
| TC | HRGMv2_2666_1 | HRGMv2_2666_1_93 | 117602 | 118492 | + | 3.A.1.3.17 |
| TC | HRGMv2_2666_1 | HRGMv2_2666_1_94 | 118592 | 119302 | + | 3.A.1.3.15 |
| TC | HRGMv2_2666_1 | HRGMv2_2666_1_95 | 119286 | 120008 | + | 3.A.1.3.25 |
Gene ID: HRGMv2_2666_1_90
Type: CAZyme
Location: 111803 - 113710 (+)
Type: CAZyme
Location: 111803 - 113710 (+)
Gene ID: HRGMv2_2666_1_91
Type: STP
Location: 113771 - 115660 (-)
Type: STP
Location: 113771 - 115660 (-)
Gene ID: HRGMv2_2666_1_92
Type: pfam
Location: 115831 - 117300 (-)
Type: pfam
Location: 115831 - 117300 (-)
Gene ID: HRGMv2_2666_1_93
Type: TC
Location: 117602 - 118492 (+)
Type: TC
Location: 117602 - 118492 (+)
Gene ID: HRGMv2_2666_1_94
Type: TC
Location: 118592 - 119302 (+)
Type: TC
Location: 118592 - 119302 (+)
Gene ID: HRGMv2_2666_1_95
Type: TC
Location: 119286 - 120008 (+)
Type: TC
Location: 119286 - 120008 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-217
Species
CAG-217 sp000436335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2666_1_90 | vegan > vegetarian | 17.76890 | 0.04863 |
| HRGMv2_2666_1_95 | vegetarian > vegan | 1.04362 | 0.00110 |