Cluster: HRGMv2_2666_CGC19

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2666_33	HRGMv2_2666_33_12	11568	12929	+	2.A.66.1.13
peptidase	HRGMv2_2666_33	HRGMv2_2666_33_13	13144	14385	+	M42.UPW
NULL(UNKNOWN)	HRGMv2_2666_33	HRGMv2_2666_33_14	14581	14700	+	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_2666_33	HRGMv2_2666_33_15	14886	17639	-	3.A.5.1.3
NULL(UNKNOWN)	HRGMv2_2666_33	HRGMv2_2666_33_16	17784	18413	-	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_2666_33	HRGMv2_2666_33_17	18663	19283	+	9.B.18.1.2
CAZyme	HRGMv2_2666_33	HRGMv2_2666_33_18	19325	21241	+	GH2

Gene ID: HRGMv2_2666_33_12
Type: TC
Location: 11568 - 12929 (+)

Gene ID: HRGMv2_2666_33_13
Type: peptidase
Location: 13144 - 14385 (+)

Gene ID: HRGMv2_2666_33_14
Type:
Location: 14581 - 14700 (+)

Gene ID: HRGMv2_2666_33_15
Type: TC
Location: 14886 - 17639 (-)

Gene ID: HRGMv2_2666_33_16
Type:
Location: 17784 - 18413 (-)

Gene ID: HRGMv2_2666_33_17
Type: TC
Location: 18663 - 19283 (+)

Gene ID: HRGMv2_2666_33_18
Type: CAZyme
Location: 19325 - 21241 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2666_33_12	vegan > vegetarian	18.00591	0.04863
HRGMv2_2666_33_14	vegan > vegetarian	18.31452	0.04863
HRGMv2_2666_33_16	vegan > vegetarian	18.11209	0.04863
HRGMv2_2666_33_17	vegan > vegetarian	2.15556	0.04768