Cluster: HRGMv2_2666_CGC18

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2666_22	HRGMv2_2666_22_23	23519	24223	+	1.C.82.1.1
pfam	HRGMv2_2666_22	HRGMv2_2666_22_24	24469	25047	+	Ribosomal_L10
pfam	HRGMv2_2666_22	HRGMv2_2666_22_25	25083	25460	+	Ribosomal_L12 \| Ribosomal_L12_N
CAZyme	HRGMv2_2666_22	HRGMv2_2666_22_26	25639	28092	+	GH3
NULL(UNKNOWN)	HRGMv2_2666_22	HRGMv2_2666_22_27	28190	28603	+	NULL(UNKNOWN) [View Structural Homologs]
NULL(UNKNOWN)	HRGMv2_2666_22	HRGMv2_2666_22_28	28605	28904	+	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_2666_22	HRGMv2_2666_22_29	29095	30456	+	2.A.2.3.2
CAZyme	HRGMv2_2666_22	HRGMv2_2666_22_30	30476	32740	+	GH2

Gene ID: HRGMv2_2666_22_23
Type: TC
Location: 23519 - 24223 (+)

Gene ID: HRGMv2_2666_22_24
Type: pfam
Location: 24469 - 25047 (+)

Gene ID: HRGMv2_2666_22_25
Type: pfam
Location: 25083 - 25460 (+)

Gene ID: HRGMv2_2666_22_26
Type: CAZyme
Location: 25639 - 28092 (+)

Gene ID: HRGMv2_2666_22_27
Type:
Location: 28190 - 28603 (+)

Gene ID: HRGMv2_2666_22_28
Type:
Location: 28605 - 28904 (+)

Gene ID: HRGMv2_2666_22_29
Type: TC
Location: 29095 - 30456 (+)

Gene ID: HRGMv2_2666_22_30
Type: CAZyme
Location: 30476 - 32740 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2666_22_27	vegan > vegetarian	18.03609	0.04863
HRGMv2_2666_22_28	vegan > vegetarian	18.25080	0.04863
HRGMv2_2666_22_29	vegan > vegetarian	18.15261	0.04094