Cluster: HRGMv2_2666_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2666
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2666_16 | HRGMv2_2666_16_35 | 32717 | 33649 | - | GT2 |
| TC | HRGMv2_2666_16 | HRGMv2_2666_16_36 | 33966 | 34589 | - | 2.A.87.1.3 |
| TF | HRGMv2_2666_16 | HRGMv2_2666_16_37 | 34945 | 35256 | + | HTH_5 |
| TC | HRGMv2_2666_16 | HRGMv2_2666_16_38 | 35258 | 37264 | + | 3.A.3.6.5 |
Gene ID: HRGMv2_2666_16_35
Type: CAZyme
Location: 32717 - 33649 (-)
Type: CAZyme
Location: 32717 - 33649 (-)
Gene ID: HRGMv2_2666_16_36
Type: TC
Location: 33966 - 34589 (-)
Type: TC
Location: 33966 - 34589 (-)
Gene ID: HRGMv2_2666_16_37
Type: TF
Location: 34945 - 35256 (+)
Type: TF
Location: 34945 - 35256 (+)
Gene ID: HRGMv2_2666_16_38
Type: TC
Location: 35258 - 37264 (+)
Type: TC
Location: 35258 - 37264 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-217
Species
CAG-217 sp000436335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2666_16_35 | vegan > vegetarian | 3.32425 | 0.04863 |
| HRGMv2_2666_16_36 | vegan > vegetarian | 5.26991 | 0.04996 |
| HRGMv2_2666_16_37 | vegan > vegetarian | 18.40947 | 0.04863 |