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Cluster: HRGMv2_2666_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2666_13 HRGMv2_2666_13_30 34170 35345 + GT4
pfam HRGMv2_2666_13 HRGMv2_2666_13_31 35488 35937 - HSP20
pfam HRGMv2_2666_13 HRGMv2_2666_13_32 36211 37344 - FrhB_FdhB_N | FrhB_FdhB_C | Fer4_7 | Fer4_9
TC HRGMv2_2666_13 HRGMv2_2666_13_33 37338 38897 - 2.A.66.1.40
pfam HRGMv2_2666_13 HRGMv2_2666_13_34 38890 39981 - PS_pyruv_trans
TC HRGMv2_2666_13 HRGMv2_2666_13_35 40190 41224 - 9.B.97.6.2
CAZyme HRGMv2_2666_13 HRGMv2_2666_13_36 41214 42128 - GT14
CAZyme HRGMv2_2666_13 HRGMv2_2666_13_37 42137 43081 - GT2
CAZyme HRGMv2_2666_13 HRGMv2_2666_13_38 43081 44115 - GT2
pfam HRGMv2_2666_13 HRGMv2_2666_13_39 44125 45321 - EpsG
CAZyme HRGMv2_2666_13 HRGMv2_2666_13_40 45343 46470 - GT4
pfam HRGMv2_2666_13 HRGMv2_2666_13_41 46482 47369 - GINT1_N
CAZyme HRGMv2_2666_13 HRGMv2_2666_13_42 47397 48383 - GT2
CAZyme HRGMv2_2666_13 HRGMv2_2666_13_43 48388 49458 - GT4
CAZyme HRGMv2_2666_13 HRGMv2_2666_13_44 49470 50606 - GT4
pfam HRGMv2_2666_13 HRGMv2_2666_13_45 50603 51511 - 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2
TC HRGMv2_2666_13 HRGMv2_2666_13_46 51508 52146 - 9.B.18.1.3
pfam HRGMv2_2666_13 HRGMv2_2666_13_47 52147 52962 - HpcH_HpaI
pfam HRGMv2_2666_13 HRGMv2_2666_13_48 52955 53689 - Hexapep | Hexapep_2
CAZyme HRGMv2_2666_13 HRGMv2_2666_13_49 54045 56420 - GT35
Gene ID: HRGMv2_2666_13_30
Type: CAZyme
Location: 34170 - 35345 (+)
Gene ID: HRGMv2_2666_13_31
Type: pfam
Location: 35488 - 35937 (-)
Gene ID: HRGMv2_2666_13_32
Type: pfam
Location: 36211 - 37344 (-)
Gene ID: HRGMv2_2666_13_33
Type: TC
Location: 37338 - 38897 (-)
Gene ID: HRGMv2_2666_13_34
Type: pfam
Location: 38890 - 39981 (-)
Gene ID: HRGMv2_2666_13_35
Type: TC
Location: 40190 - 41224 (-)
Gene ID: HRGMv2_2666_13_36
Type: CAZyme
Location: 41214 - 42128 (-)
Gene ID: HRGMv2_2666_13_37
Type: CAZyme
Location: 42137 - 43081 (-)
Gene ID: HRGMv2_2666_13_38
Type: CAZyme
Location: 43081 - 44115 (-)
Gene ID: HRGMv2_2666_13_39
Type: pfam
Location: 44125 - 45321 (-)
Gene ID: HRGMv2_2666_13_40
Type: CAZyme
Location: 45343 - 46470 (-)
Gene ID: HRGMv2_2666_13_41
Type: pfam
Location: 46482 - 47369 (-)
Gene ID: HRGMv2_2666_13_42
Type: CAZyme
Location: 47397 - 48383 (-)
Gene ID: HRGMv2_2666_13_43
Type: CAZyme
Location: 48388 - 49458 (-)
Gene ID: HRGMv2_2666_13_44
Type: CAZyme
Location: 49470 - 50606 (-)
Gene ID: HRGMv2_2666_13_45
Type: pfam
Location: 50603 - 51511 (-)
Gene ID: HRGMv2_2666_13_46
Type: TC
Location: 51508 - 52146 (-)
Gene ID: HRGMv2_2666_13_47
Type: pfam
Location: 52147 - 52962 (-)
Gene ID: HRGMv2_2666_13_48
Type: pfam
Location: 52955 - 53689 (-)
Gene ID: HRGMv2_2666_13_49
Type: CAZyme
Location: 54045 - 56420 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2666_13_32 vegan > vegetarian 17.62737 0.04863
HRGMv2_2666_13_40 vegan > vegetarian 17.69271 0.04863
HRGMv2_2666_13_41 vegan > vegetarian 17.77931 0.04863
HRGMv2_2666_13_48 vegan > vegetarian 18.01503 0.04863

🧭 Explore Read Mapping of CGC

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