Cluster: HRGMv2_2665_CGC9
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2665
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2665_2 | HRGMv2_2665_2_1074 | 1030647 | 1033073 | - | GT35 |
| CAZyme | HRGMv2_2665_2 | HRGMv2_2665_2_1075 | 1033082 | 1034854 | - | GT5 |
| pfam | HRGMv2_2665_2 | HRGMv2_2665_2_1076 | 1034972 | 1036087 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2665_2 | HRGMv2_2665_2_1077 | 1036084 | 1037292 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2665_2 | HRGMv2_2665_2_1078 | 1037289 | 1039211 | - | CBM48 | GH13_9 |
| NULL(UNKNOWN) | HRGMv2_2665_2 | HRGMv2_2665_2_1079 | 1039533 | 1039889 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2665_2 | HRGMv2_2665_2_1080 | 1040003 | 1040545 | + | SpoVT_AbrB |
| TC | HRGMv2_2665_2 | HRGMv2_2665_2_1081 | 1040656 | 1042080 | + | 2.A.25.1.3 |
| TC | HRGMv2_2665_2 | HRGMv2_2665_2_1082 | 1042274 | 1043389 | + | 9.B.10.1.1 |
Gene ID: HRGMv2_2665_2_1074
Type: CAZyme
Location: 1030647 - 1033073 (-)
Type: CAZyme
Location: 1030647 - 1033073 (-)
Gene ID: HRGMv2_2665_2_1075
Type: CAZyme
Location: 1033082 - 1034854 (-)
Type: CAZyme
Location: 1033082 - 1034854 (-)
Gene ID: HRGMv2_2665_2_1076
Type: pfam
Location: 1034972 - 1036087 (-)
Type: pfam
Location: 1034972 - 1036087 (-)
Gene ID: HRGMv2_2665_2_1077
Type: pfam
Location: 1036084 - 1037292 (-)
Type: pfam
Location: 1036084 - 1037292 (-)
Gene ID: HRGMv2_2665_2_1078
Type: CAZyme
Location: 1037289 - 1039211 (-)
Type: CAZyme
Location: 1037289 - 1039211 (-)
Gene ID: HRGMv2_2665_2_1079
Type:
Location: 1039533 - 1039889 (+)
Type:
Location: 1039533 - 1039889 (+)
Gene ID: HRGMv2_2665_2_1080
Type: TF
Location: 1040003 - 1040545 (+)
Type: TF
Location: 1040003 - 1040545 (+)
Gene ID: HRGMv2_2665_2_1081
Type: TC
Location: 1040656 - 1042080 (+)
Type: TC
Location: 1040656 - 1042080 (+)
Gene ID: HRGMv2_2665_2_1082
Type: TC
Location: 1042274 - 1043389 (+)
Type: TC
Location: 1042274 - 1043389 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Dysosmobacter
Species
Dysosmobacter welbionis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.