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Cluster: HRGMv2_2665_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2665_1 HRGMv2_2665_1_239 258709 260259 + 3.A.1.5.11
TC HRGMv2_2665_1 HRGMv2_2665_1_240 260311 261261 + 3.A.1.5.32
TC HRGMv2_2665_1 HRGMv2_2665_1_241 261258 262070 + 3.A.1.5.27
TC HRGMv2_2665_1 HRGMv2_2665_1_242 262070 262861 + 3.A.1.5.21
TC HRGMv2_2665_1 HRGMv2_2665_1_243 262858 263595 + 3.A.1.5.10
pfam HRGMv2_2665_1 HRGMv2_2665_1_244 263598 264719 + DUF3810
CAZyme HRGMv2_2665_1 HRGMv2_2665_1_245 264716 265531 + GT8
Gene ID: HRGMv2_2665_1_239
Type: TC
Location: 258709 - 260259 (+)
Gene ID: HRGMv2_2665_1_240
Type: TC
Location: 260311 - 261261 (+)
Gene ID: HRGMv2_2665_1_241
Type: TC
Location: 261258 - 262070 (+)
Gene ID: HRGMv2_2665_1_242
Type: TC
Location: 262070 - 262861 (+)
Gene ID: HRGMv2_2665_1_243
Type: TC
Location: 262858 - 263595 (+)
Gene ID: HRGMv2_2665_1_244
Type: pfam
Location: 263598 - 264719 (+)
Gene ID: HRGMv2_2665_1_245
Type: CAZyme
Location: 264716 - 265531 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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