Cluster: HRGMv2_2658_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2658
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2658_3 | HRGMv2_2658_3_84 | 96877 | 98301 | + | GH49 |
| pfam | HRGMv2_2658_3 | HRGMv2_2658_3_85 | 98390 | 98992 | + | RuvA_N | RuvA_C | HHH_5 |
| TF | HRGMv2_2658_3 | HRGMv2_2658_3_86 | 98999 | 100585 | + | HTH_8 |
| TC | HRGMv2_2658_3 | HRGMv2_2658_3_87 | 100676 | 102448 | + | 8.A.7.1.1 |
Gene ID: HRGMv2_2658_3_84
Type: CAZyme
Location: 96877 - 98301 (+)
Type: CAZyme
Location: 96877 - 98301 (+)
Gene ID: HRGMv2_2658_3_85
Type: pfam
Location: 98390 - 98992 (+)
Type: pfam
Location: 98390 - 98992 (+)
Gene ID: HRGMv2_2658_3_86
Type: TF
Location: 98999 - 100585 (+)
Type: TF
Location: 98999 - 100585 (+)
Gene ID: HRGMv2_2658_3_87
Type: TC
Location: 100676 - 102448 (+)
Type: TC
Location: 100676 - 102448 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900547395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.