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Cluster: HRGMv2_2658_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2658_3 HRGMv2_2658_3_53 60372 61838 - GT5
pfam HRGMv2_2658_3 HRGMv2_2658_3_54 61909 62634 - YgjP-like
pfam HRGMv2_2658_3 HRGMv2_2658_3_55 62641 63282 - MazG
TC HRGMv2_2658_3 HRGMv2_2658_3_56 63286 65037 - 2.A.49.6.1
NULL(UNKNOWN) HRGMv2_2658_3 HRGMv2_2658_3_57 65148 65516 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2658_3 HRGMv2_2658_3_58 65602 68391 + 3.A.5.1.1
TC HRGMv2_2658_3 HRGMv2_2658_3_59 68521 70041 + 2.A.111.2.1
TC HRGMv2_2658_3 HRGMv2_2658_3_60 70146 71849 + 2.A.22.4.2
Gene ID: HRGMv2_2658_3_53
Type: CAZyme
Location: 60372 - 61838 (-)
Gene ID: HRGMv2_2658_3_54
Type: pfam
Location: 61909 - 62634 (-)
Gene ID: HRGMv2_2658_3_55
Type: pfam
Location: 62641 - 63282 (-)
Gene ID: HRGMv2_2658_3_56
Type: TC
Location: 63286 - 65037 (-)
Gene ID: HRGMv2_2658_3_57
Type:
Location: 65148 - 65516 (+)
Gene ID: HRGMv2_2658_3_58
Type: TC
Location: 65602 - 68391 (+)
Gene ID: HRGMv2_2658_3_59
Type: TC
Location: 68521 - 70041 (+)
Gene ID: HRGMv2_2658_3_60
Type: TC
Location: 70146 - 71849 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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