Cluster: HRGMv2_2658_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2658
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2658_3 | HRGMv2_2658_3_1 | 134 | 892 | - | 3.D.10.1.2 |
| TC | HRGMv2_2658_3 | HRGMv2_2658_3_2 | 908 | 2854 | - | 3.D.10.1.2 |
| TC | HRGMv2_2658_3 | HRGMv2_2658_3_3 | 2867 | 3709 | - | 3.D.10.1.2 |
| pfam | HRGMv2_2658_3 | HRGMv2_2658_3_4 | 3867 | 4898 | + | CorA |
| pfam | HRGMv2_2658_3 | HRGMv2_2658_3_5 | 4911 | 6137 | + | DUF1015 |
| CAZyme | HRGMv2_2658_3 | HRGMv2_2658_3_6 | 6143 | 7855 | + | GH20 |
Gene ID: HRGMv2_2658_3_1
Type: TC
Location: 134 - 892 (-)
Type: TC
Location: 134 - 892 (-)
Gene ID: HRGMv2_2658_3_2
Type: TC
Location: 908 - 2854 (-)
Type: TC
Location: 908 - 2854 (-)
Gene ID: HRGMv2_2658_3_3
Type: TC
Location: 2867 - 3709 (-)
Type: TC
Location: 2867 - 3709 (-)
Gene ID: HRGMv2_2658_3_4
Type: pfam
Location: 3867 - 4898 (+)
Type: pfam
Location: 3867 - 4898 (+)
Gene ID: HRGMv2_2658_3_5
Type: pfam
Location: 4911 - 6137 (+)
Type: pfam
Location: 4911 - 6137 (+)
Gene ID: HRGMv2_2658_3_6
Type: CAZyme
Location: 6143 - 7855 (+)
Type: CAZyme
Location: 6143 - 7855 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900547395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.