Cluster: HRGMv2_2658_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2658
- CGC Family ID: CGCFAM_00013
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2658_22 | HRGMv2_2658_22_24 | 19832 | 20920 | - | GT28 |
| TC | HRGMv2_2658_22 | HRGMv2_2658_22_25 | 20913 | 22049 | - | 2.A.103.1.3 |
| pfam | HRGMv2_2658_22 | HRGMv2_2658_22_26 | 22067 | 23215 | - | LysM | LysM | LysM |
| pfam | HRGMv2_2658_22 | HRGMv2_2658_22_27 | 23236 | 24516 | - | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_2658_22 | HRGMv2_2658_22_28 | 24521 | 25621 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_2658_22_24
Type: CAZyme
Location: 19832 - 20920 (-)
Type: CAZyme
Location: 19832 - 20920 (-)
Gene ID: HRGMv2_2658_22_25
Type: TC
Location: 20913 - 22049 (-)
Type: TC
Location: 20913 - 22049 (-)
Gene ID: HRGMv2_2658_22_26
Type: pfam
Location: 22067 - 23215 (-)
Type: pfam
Location: 22067 - 23215 (-)
Gene ID: HRGMv2_2658_22_27
Type: pfam
Location: 23236 - 24516 (-)
Type: pfam
Location: 23236 - 24516 (-)
Gene ID: HRGMv2_2658_22_28
Type: TC
Location: 24521 - 25621 (-)
Type: TC
Location: 24521 - 25621 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900547395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.