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Cluster: HRGMv2_2658_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2658_21 HRGMv2_2658_21_14 11078 11407 - 8.A.58.2.6
pfam HRGMv2_2658_21 HRGMv2_2658_21_15 11418 11711 - TM2 | Zn_Ribbon_1
pfam HRGMv2_2658_21 HRGMv2_2658_21_16 11837 12178 - Zn_Ribbon_1
CAZyme HRGMv2_2658_21 HRGMv2_2658_21_17 12317 15040 - GH139
TC HRGMv2_2658_21 HRGMv2_2658_21_18 15075 15704 - 2.A.76.1.10
peptidase HRGMv2_2658_21 HRGMv2_2658_21_19 15813 16724 + S09.UPW
TC HRGMv2_2658_21 HRGMv2_2658_21_20 16793 18529 + 3.A.1.106.1
NULL(UNKNOWN) HRGMv2_2658_21 HRGMv2_2658_21_21 18533 18988 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2658_21 HRGMv2_2658_21_22 19119 20978 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2658_21 HRGMv2_2658_21_23 21044 22198 - 2.A.1.2.14
pfam HRGMv2_2658_21 HRGMv2_2658_21_24 22317 23240 + UDG
pfam HRGMv2_2658_21 HRGMv2_2658_21_25 23243 25204 - Helicase_C | UVR | ResIII | UvrB | UvrB_inter
CAZyme HRGMv2_2658_21 HRGMv2_2658_21_26 25419 26756 + GH109
Gene ID: HRGMv2_2658_21_14
Type: TC
Location: 11078 - 11407 (-)
Gene ID: HRGMv2_2658_21_15
Type: pfam
Location: 11418 - 11711 (-)
Gene ID: HRGMv2_2658_21_16
Type: pfam
Location: 11837 - 12178 (-)
Gene ID: HRGMv2_2658_21_17
Type: CAZyme
Location: 12317 - 15040 (-)
Gene ID: HRGMv2_2658_21_18
Type: TC
Location: 15075 - 15704 (-)
Gene ID: HRGMv2_2658_21_19
Type: peptidase
Location: 15813 - 16724 (+)
Gene ID: HRGMv2_2658_21_20
Type: TC
Location: 16793 - 18529 (+)
Gene ID: HRGMv2_2658_21_21
Type:
Location: 18533 - 18988 (+)
Gene ID: HRGMv2_2658_21_22
Type:
Location: 19119 - 20978 (+)
Gene ID: HRGMv2_2658_21_23
Type: TC
Location: 21044 - 22198 (-)
Gene ID: HRGMv2_2658_21_24
Type: pfam
Location: 22317 - 23240 (+)
Gene ID: HRGMv2_2658_21_25
Type: pfam
Location: 23243 - 25204 (-)
Gene ID: HRGMv2_2658_21_26
Type: CAZyme
Location: 25419 - 26756 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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