Cluster: HRGMv2_2658_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2658
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2658_17 | HRGMv2_2658_17_47 | 31396 | 32721 | + | 1.A.23.4.2 |
| TC | HRGMv2_2658_17 | HRGMv2_2658_17_48 | 32759 | 34081 | - | 2.A.40.7.6 |
| pfam | HRGMv2_2658_17 | HRGMv2_2658_17_49 | 34182 | 34490 | - | TRL |
| TC | HRGMv2_2658_17 | HRGMv2_2658_17_50 | 34588 | 36621 | - | 3.A.3.5.15 |
| pfam | HRGMv2_2658_17 | HRGMv2_2658_17_51 | 36624 | 36914 | - | Trns_repr_metal |
| CAZyme | HRGMv2_2658_17 | HRGMv2_2658_17_52 | 37079 | 39514 | + | GH146 |
Gene ID: HRGMv2_2658_17_47
Type: TC
Location: 31396 - 32721 (+)
Type: TC
Location: 31396 - 32721 (+)
Gene ID: HRGMv2_2658_17_48
Type: TC
Location: 32759 - 34081 (-)
Type: TC
Location: 32759 - 34081 (-)
Gene ID: HRGMv2_2658_17_49
Type: pfam
Location: 34182 - 34490 (-)
Type: pfam
Location: 34182 - 34490 (-)
Gene ID: HRGMv2_2658_17_50
Type: TC
Location: 34588 - 36621 (-)
Type: TC
Location: 34588 - 36621 (-)
Gene ID: HRGMv2_2658_17_51
Type: pfam
Location: 36624 - 36914 (-)
Type: pfam
Location: 36624 - 36914 (-)
Gene ID: HRGMv2_2658_17_52
Type: CAZyme
Location: 37079 - 39514 (+)
Type: CAZyme
Location: 37079 - 39514 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900547395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.