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Cluster: HRGMv2_2658_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2658_1 HRGMv2_2658_1_144 154594 155211 - 1.A.16.5.2
pfam HRGMv2_2658_1 HRGMv2_2658_1_145 155287 155790 + AhpC-TSA | Redoxin
TC HRGMv2_2658_1 HRGMv2_2658_1_146 156044 157513 - 2.A.6.2.44
TC HRGMv2_2658_1 HRGMv2_2658_1_147 157539 160694 - 2.A.6.2.16
TC HRGMv2_2658_1 HRGMv2_2658_1_148 160724 161878 - 2.A.6.2.47
STP HRGMv2_2658_1 HRGMv2_2658_1_149 161893 162570 - TetR_N
CAZyme HRGMv2_2658_1 HRGMv2_2658_1_150 162989 166255 + GH2
Gene ID: HRGMv2_2658_1_144
Type: TC
Location: 154594 - 155211 (-)
Gene ID: HRGMv2_2658_1_145
Type: pfam
Location: 155287 - 155790 (+)
Gene ID: HRGMv2_2658_1_146
Type: TC
Location: 156044 - 157513 (-)
Gene ID: HRGMv2_2658_1_147
Type: TC
Location: 157539 - 160694 (-)
Gene ID: HRGMv2_2658_1_148
Type: TC
Location: 160724 - 161878 (-)
Gene ID: HRGMv2_2658_1_149
Type: STP
Location: 161893 - 162570 (-)
Gene ID: HRGMv2_2658_1_150
Type: CAZyme
Location: 162989 - 166255 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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