Cluster: HRGMv2_2658_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2658
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2658_16 | HRGMv2_2658_16_32 | 40162 | 42414 | + | GH92 |
| pfam | HRGMv2_2658_16 | HRGMv2_2658_16_33 | 42733 | 44271 | + | Chlam_PMP |
| TC | HRGMv2_2658_16 | HRGMv2_2658_16_34 | 44348 | 46903 | - | 3.A.9.1.2 |
| CAZyme | HRGMv2_2658_16 | HRGMv2_2658_16_35 | 47120 | 48451 | + | CE11 |
Gene ID: HRGMv2_2658_16_32
Type: CAZyme
Location: 40162 - 42414 (+)
Type: CAZyme
Location: 40162 - 42414 (+)
Gene ID: HRGMv2_2658_16_33
Type: pfam
Location: 42733 - 44271 (+)
Type: pfam
Location: 42733 - 44271 (+)
Gene ID: HRGMv2_2658_16_34
Type: TC
Location: 44348 - 46903 (-)
Type: TC
Location: 44348 - 46903 (-)
Gene ID: HRGMv2_2658_16_35
Type: CAZyme
Location: 47120 - 48451 (+)
Type: CAZyme
Location: 47120 - 48451 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900547395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.