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Cluster: HRGMv2_2658_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2658_15 HRGMv2_2658_15_35 40911 42257 - GH130_3
STP HRGMv2_2658_15 HRGMv2_2658_15_36 42413 43969 + CBS | CBS
pfam HRGMv2_2658_15 HRGMv2_2658_15_37 44008 45747 + FGE-sulfatase
TC HRGMv2_2658_15 HRGMv2_2658_15_38 45891 46631 + 1.B.42.1.2
pfam HRGMv2_2658_15 HRGMv2_2658_15_39 46635 47576 + Hpr_kinase_N | Hpr_kinase_C
STP HRGMv2_2658_15 HRGMv2_2658_15_40 47595 51203 + B12-binding | B12-binding_2
TC HRGMv2_2658_15 HRGMv2_2658_15_41 51213 52487 + 2.A.103.1.2
Gene ID: HRGMv2_2658_15_35
Type: CAZyme
Location: 40911 - 42257 (-)
Gene ID: HRGMv2_2658_15_36
Type: STP
Location: 42413 - 43969 (+)
Gene ID: HRGMv2_2658_15_37
Type: pfam
Location: 44008 - 45747 (+)
Gene ID: HRGMv2_2658_15_38
Type: TC
Location: 45891 - 46631 (+)
Gene ID: HRGMv2_2658_15_39
Type: pfam
Location: 46635 - 47576 (+)
Gene ID: HRGMv2_2658_15_40
Type: STP
Location: 47595 - 51203 (+)
Gene ID: HRGMv2_2658_15_41
Type: TC
Location: 51213 - 52487 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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