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Cluster: HRGMv2_2658_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2658_14 HRGMv2_2658_14_34 38610 39899 - 2.A.1.49.7
CAZyme HRGMv2_2658_14 HRGMv2_2658_14_35 40040 42466 + GH95
CAZyme HRGMv2_2658_14 HRGMv2_2658_14_36 42480 44522 + GH67
CAZyme HRGMv2_2658_14 HRGMv2_2658_14_37 44635 45963 - CE7
CAZyme HRGMv2_2658_14 HRGMv2_2658_14_38 45982 48534 - GH115
NULL(UNKNOWN) HRGMv2_2658_14 HRGMv2_2658_14_39 48699 49478 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2658_14 HRGMv2_2658_14_40 49713 51449 - CBM91 | GH43_12
CAZyme HRGMv2_2658_14 HRGMv2_2658_14_41 51632 53230 + CBM91 | GH43_10
NULL(UNKNOWN) HRGMv2_2658_14 HRGMv2_2658_14_42 53315 54751 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2658_14 HRGMv2_2658_14_43 54905 55870 - GH43_1
CAZyme HRGMv2_2658_14 HRGMv2_2658_14_44 55877 57028 - GH10
TC HRGMv2_2658_14 HRGMv2_2658_14_45 57022 58518 - 2.A.2.3.4
CAZyme HRGMv2_2658_14 HRGMv2_2658_14_46 58524 60479 - GH97
Gene ID: HRGMv2_2658_14_34
Type: TC
Location: 38610 - 39899 (-)
Gene ID: HRGMv2_2658_14_35
Type: CAZyme
Location: 40040 - 42466 (+)
Gene ID: HRGMv2_2658_14_36
Type: CAZyme
Location: 42480 - 44522 (+)
Gene ID: HRGMv2_2658_14_37
Type: CAZyme
Location: 44635 - 45963 (-)
Gene ID: HRGMv2_2658_14_38
Type: CAZyme
Location: 45982 - 48534 (-)
Gene ID: HRGMv2_2658_14_39
Type:
Location: 48699 - 49478 (-)
Gene ID: HRGMv2_2658_14_40
Type: CAZyme
Location: 49713 - 51449 (-)
Gene ID: HRGMv2_2658_14_41
Type: CAZyme
Location: 51632 - 53230 (+)
Gene ID: HRGMv2_2658_14_42
Type:
Location: 53315 - 54751 (-)
Gene ID: HRGMv2_2658_14_43
Type: CAZyme
Location: 54905 - 55870 (-)
Gene ID: HRGMv2_2658_14_44
Type: CAZyme
Location: 55877 - 57028 (-)
Gene ID: HRGMv2_2658_14_45
Type: TC
Location: 57022 - 58518 (-)
Gene ID: HRGMv2_2658_14_46
Type: CAZyme
Location: 58524 - 60479 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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