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Cluster: HRGMv2_2658_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2658_13 HRGMv2_2658_13_17 21954 23060 + 3.A.11.1.3
pfam HRGMv2_2658_13 HRGMv2_2658_13_18 23090 24910 + Sulfatase
pfam HRGMv2_2658_13 HRGMv2_2658_13_19 24947 25933 - HMGL-like
CAZyme HRGMv2_2658_13 HRGMv2_2658_13_20 26188 27015 + CE1
TC HRGMv2_2658_13 HRGMv2_2658_13_21 27076 27843 - 2.A.102.2.5
pfam HRGMv2_2658_13 HRGMv2_2658_13_22 27962 28864 + PMI_typeI_cat
NULL(UNKNOWN) HRGMv2_2658_13 HRGMv2_2658_13_23 28979 29248 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2658_13 HRGMv2_2658_13_24 29517 29969 + 2.A.7.2.1
Gene ID: HRGMv2_2658_13_17
Type: TC
Location: 21954 - 23060 (+)
Gene ID: HRGMv2_2658_13_18
Type: pfam
Location: 23090 - 24910 (+)
Gene ID: HRGMv2_2658_13_19
Type: pfam
Location: 24947 - 25933 (-)
Gene ID: HRGMv2_2658_13_20
Type: CAZyme
Location: 26188 - 27015 (+)
Gene ID: HRGMv2_2658_13_21
Type: TC
Location: 27076 - 27843 (-)
Gene ID: HRGMv2_2658_13_22
Type: pfam
Location: 27962 - 28864 (+)
Gene ID: HRGMv2_2658_13_23
Type:
Location: 28979 - 29248 (+)
Gene ID: HRGMv2_2658_13_24
Type: TC
Location: 29517 - 29969 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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