Cluster: HRGMv2_2658_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2658
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2658_11 | HRGMv2_2658_11_55 | 57455 | 58144 | + | 3.A.1.114.1 |
| CAZyme | HRGMv2_2658_11 | HRGMv2_2658_11_56 | 58203 | 60974 | - | GH2 |
| pfam | HRGMv2_2658_11 | HRGMv2_2658_11_57 | 61140 | 62123 | - | DAPDH_C |
| TC | HRGMv2_2658_11 | HRGMv2_2658_11_58 | 62387 | 64294 | + | 3.A.1.120.6 |
| pfam | HRGMv2_2658_11 | HRGMv2_2658_11_59 | 64575 | 65483 | - | PD40 | PD40 | PD40 |
| TC | HRGMv2_2658_11 | HRGMv2_2658_11_60 | 65617 | 66540 | - | 2.A.28.2.4 |
Gene ID: HRGMv2_2658_11_55
Type: TC
Location: 57455 - 58144 (+)
Type: TC
Location: 57455 - 58144 (+)
Gene ID: HRGMv2_2658_11_56
Type: CAZyme
Location: 58203 - 60974 (-)
Type: CAZyme
Location: 58203 - 60974 (-)
Gene ID: HRGMv2_2658_11_57
Type: pfam
Location: 61140 - 62123 (-)
Type: pfam
Location: 61140 - 62123 (-)
Gene ID: HRGMv2_2658_11_58
Type: TC
Location: 62387 - 64294 (+)
Type: TC
Location: 62387 - 64294 (+)
Gene ID: HRGMv2_2658_11_59
Type: pfam
Location: 64575 - 65483 (-)
Type: pfam
Location: 64575 - 65483 (-)
Gene ID: HRGMv2_2658_11_60
Type: TC
Location: 65617 - 66540 (-)
Type: TC
Location: 65617 - 66540 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900547395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.