Cluster: HRGMv2_2658_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2658
- CGC Family ID: CGCFAM_01673
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2658_10 | HRGMv2_2658_10_33 | 37275 | 39110 | + | 9.B.14.3.3 |
| pfam | HRGMv2_2658_10 | HRGMv2_2658_10_34 | 39107 | 39520 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| pfam | HRGMv2_2658_10 | HRGMv2_2658_10_35 | 39560 | 40510 | + | LPG_synthase_C |
| CAZyme | HRGMv2_2658_10 | HRGMv2_2658_10_36 | 40532 | 44257 | - | GH2 |
Gene ID: HRGMv2_2658_10_33
Type: TC
Location: 37275 - 39110 (+)
Type: TC
Location: 37275 - 39110 (+)
Gene ID: HRGMv2_2658_10_34
Type: pfam
Location: 39107 - 39520 (-)
Type: pfam
Location: 39107 - 39520 (-)
Gene ID: HRGMv2_2658_10_35
Type: pfam
Location: 39560 - 40510 (+)
Type: pfam
Location: 39560 - 40510 (+)
Gene ID: HRGMv2_2658_10_36
Type: CAZyme
Location: 40532 - 44257 (-)
Type: CAZyme
Location: 40532 - 44257 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900547395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.