Cluster: HRGMv2_2658_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2658
- CGC Family ID: CGCFAM_06978
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2658_1 | HRGMv2_2658_1_10 | 7922 | 9211 | - | GH171 |
| pfam | HRGMv2_2658_1 | HRGMv2_2658_1_11 | 9245 | 9847 | - | DUF2062 |
| STP | HRGMv2_2658_1 | HRGMv2_2658_1_12 | 10018 | 10746 | + | Sigma70_r2 | Sigma70_r3 | Sigma70_r4 |
| TC | HRGMv2_2658_1 | HRGMv2_2658_1_13 | 10948 | 13035 | - | 9.A.8.1.6 |
Gene ID: HRGMv2_2658_1_10
Type: CAZyme
Location: 7922 - 9211 (-)
Type: CAZyme
Location: 7922 - 9211 (-)
Gene ID: HRGMv2_2658_1_11
Type: pfam
Location: 9245 - 9847 (-)
Type: pfam
Location: 9245 - 9847 (-)
Gene ID: HRGMv2_2658_1_12
Type: STP
Location: 10018 - 10746 (+)
Type: STP
Location: 10018 - 10746 (+)
Gene ID: HRGMv2_2658_1_13
Type: TC
Location: 10948 - 13035 (-)
Type: TC
Location: 10948 - 13035 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900547395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.